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Stopped using the transformers (4.39.3) trainer compute_metrics to calculate custom metrics as large validation sets will crash #54

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merged 3 commits into from
Sep 9, 2024

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@ChaoPang ChaoPang commented Sep 9, 2024

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…y for the evaluation step, the reason is that for large eval datasets, the evalulation steps can run out of the CPU memory as it keeps all predictions on CPU
…d from the OMOP data, where the age_at_index is labelled as age
@ChaoPang ChaoPang merged commit e144717 into main Sep 9, 2024
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@ChaoPang ChaoPang deleted the remove_eval_compute_metrics branch September 9, 2024 14:19
@ChaoPang ChaoPang changed the title Remove eval compute metrics Stopped using the transformers (4.39.3) trainer compute_metrics to calculate custom metrics as large validation sets will crash Sep 9, 2024
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